Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0050100

Sequence Length

250 nt

GC Content

0.3160

AAUAUGACAGAUACCUAGCAUCUAGCAAAAUAAUGGCAGCUGCUUACCUUGACCCCAACUUGAAUCACACACCAAAUUCGAGUACUAAGACUCACCUGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUGAAUGAACAGUUUAUGAAAGAAUGAACAUGGAGGAAAGAGUCACAUGACCUAUUUCGAACAGUGGUGAAGGUCAUUUGUUUGAAAGUACUGUCUAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.00 kcal/mol

Ensemble Metrics

Free Energy: -38.27

Frequency: 0.0010

Diversity: 31.96

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((.(((..((((.((.((.........)))).))))...(((..(((((((((((((..........)))))))).......(((....)))............................................................((((((......)))))).))).)).))).(((....)))...((((((((((..((((...))))))))))))))))))))))......

Thermodynamic Ensemble Prediction

.....(((((.(((..((((.((.{(,......,}}})).))))..,(((..{((((((((((((..........)))))))).......,,,...})))..........................................................,,((((((......)))))).))),)).,||.(((....)))},.{((((((((({{({,,...)))))))))))))}))))))))......