Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0050400

Sequence Length

168 nt

GC Content

0.4167

GUUGUUGUGGAAGCUUGGAGGAAUAAUACCUUUUAAACGUAGAAGUUAGUACUGGAAAGGAUUUCCUUUGGGUCUGGGAAGGUGAGGAAAGAUAGUGAUACAGAAUUGUGGGAGAAGAGCAUGCUAGGCAAAGGUAACUACAUCUUUCUGAAGGUGGGGAAUGAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-23.00 kcal/mol

Ensemble Metrics

Free Energy: -27.39

Frequency: 0.0008

Diversity: 59.69

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..(.(((((..(((((((((((.....((((((....(((........)))..))))))..)))))))..((((((.(.(.(........(((((........)))))........).).).))))))..))))..))))).)..)((....((.....))....))

Thermodynamic Ensemble Prediction

(((..,.,...}||((,{{{{{,..,{,((((({..,,{{{....,,..}}|,.}|||||,,}}))))).,||{{{{.{.,,{..,,,,,,(({((..,,,...}}|}|,,.,......}.).)))})}....}},.}}}|}||||}}}.}}}}}}.,........))