Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0051500

Sequence Length

250 nt

GC Content

0.3720

AUUGCGGAAGCAUGAGAAGAUUCUGUAACUGAGAGGCAUUCUUCAAGCUGCUGGAAAAUAUUACAGAAGGAACACCUUCCAAAUUUUGCUUCAAGCUCUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCUAGAAUGCAGUGUCAUAAUCAUAGCUCACUGUAUCCUUGAAGUCCUGGGCUCAAGCAGUCCUCCUGCCUCAGCCUCCUGAGUAGCUGGGACUACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-45.90 kcal/mol

Ensemble Metrics

Free Energy: -51.29

Frequency: 0.0002

Diversity: 65.81

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((((((...........))))))))(((.((((....)))).((((...(.(((((......(((((....)))))...))))).)....)))).............................................................((((((((...((....))...)))))))).(((((.(((...)))))))).((((((.((((.((((....))))))))..)))))).)))

Thermodynamic Ensemble Prediction

.{(((((((,{.......,.||||}}}}(({.{{({,..,||||.{{{||||{,{,,,..,,...(((((....)))))...,,,,)})}}}.|))},,,...................................................,,,,.{.((((((((...{,....}}...)))))))).||{{,|{{{...}||}}}}}.((((({.(((|{((((....))))))))..)))))).)))