Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTN_0002100

Sequence Length

250 nt

GC Content

0.3280

AUAUGUUCCAGGGAAUUCAAAUGAGCCAGCCAGAAGCUGCUAGAGGAGAGAAAACAGGUAGGUUAUUAGAUUAUUUUUAACCGGUGUCUAUGCUUAAAUCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUUAUAUGCAAAUACUACACUGGUUUAUAUCAGGGACUUGAACAUUCAUGGAUUUUGGUUUCCACAGGGCUCCUGGAACCAAUCCCCCACCAAUGACAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-30.60 kcal/mol

Ensemble Metrics

Free Energy: -36.90

Frequency: 0.0000

Diversity: 73.20

Structure Visualization

Structure Prediction

MFE Structure Prediction

((..(((((((((..........(((.(((.....)))))).(((.(.(((...((....(((((............)))))..))))).).))).......................................................((..(((....)))..)).(((((....)))))...((((........((((........))))))))..)))))))))..))(...............)

Thermodynamic Ensemble Prediction

({..(((((((({...,,....,(((((((.....}}}}}}...,.|,,,....{,,,|.{{{{{...{,....,..}||||{{{{|.,.{{|,,.......................................................,,..,,.}}}.,}}..)),|||||,...}}}}}.,,}}||,.,.,||.{(({..,{|||,|||,.,||..,)))))))),,)){...|,....}}....)