Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTPN14_0004300

Sequence Length

265 nt

GC Content

0.4302

UGGAAUCCUGCCAGCAGAAGCUGAACUGAUGUACAUCAAUGAAGUUGAACGUUUGGAUGGAUUUGGACAGGAAAUCUUCCCUGUAAAGGACAAUCAUGGAAACUGUGUACACCUUGGCAUUUUCUUUAUGGGGAUUUUCGUGAGGAACAGAAUUGGAAGACAAGCGGUAAUAUACAGGUGGAAUGACAUGGGGAAUAUCACUCAUAACAAGUCGACCAUUCUAGUGGAGCUCAUCAACAAAGAAGAGACUGCCCUCUUUCACACG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-54.50 kcal/mol

Ensemble Metrics

Free Energy: -59.59

Frequency: 0.0003

Diversity: 79.72

Structure Visualization

Structure Prediction

MFE Structure Prediction

((...((((..((((....))))..((((....((((((((........))))..))))...)))).((.((((...(((((((((((((...(((.((............)).)))....))))))))))))).)))).)))))).))....(((((((...(((((........(((.((.((..(((((........)))))..))..)).))).(((....))).(((.((......)).))))))))..)))))))....

Thermodynamic Ensemble Prediction

{{{{{((({.{((((...,|||}..,{(((,,.,||||,{..,}}}...}}}},}}.,}}}|}}.,.((,({{{...{((((((((((((...{((.((...,,,.,....)).)))....))))))))))))).}))},}},}},.,,....(((((((...(((((........(((.((.{{..(((((........)))))..,,..)).))).{{{,...}}}.(((.((......)).))))))))..)))))))....