Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTPN14_0005600

Sequence Length

328 nt

GC Content

0.5884

CUAUCUUCCAGAGGGCCACACUGGGCAUGGACACCCUUUUCCCUGCCUGGAGGAGCACAGGUGAUAGUGUAAUUUUCCAGUCACGAAACUGCUAAGGCCAUCUCAGGGGCGUGUGCGCCAGGAUAGGCGGGCGGCGUCCGAGGACCACAUAGCCAUGCCUUUUGGUCUGAAGCUCCGCCGGACACGGCGCUACAACGUCCUGAGCAAGAACUGCUUUGUCACACGGAUUCGCCUGCUGGACAGCAAUGUUAUCGAGUGCACGCUGUCGGUGGAAAGCACAGGGCAAGAAUGCCUGGAGGCUGUGGCCCAGAGGCUGGAGCUGCGAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-117.50 kcal/mol

Ensemble Metrics

Free Energy: -124.31

Frequency: 0.0000

Diversity: 105.67

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.((..((...((((((((((((((((.....((((((((..((.((((((((((((........))))..)))))))).)).)))).((((....(((((((.((.((....)).))..))..(((((((((.((((((((((....((((((.(((....))).)).......((((....))))))))....)))))(((((.....))))).......)))))))))))))).((((((..(((........))).)))))))))))..)))).)))).....))))))))....))))))))...))..))))((.....))

Thermodynamic Ensemble Prediction

({.,{.,((,,.((((((((((((((({,,,..,{{{{{|||.|||||||{{{,((((.{{{{{,,,|||..,,,||||{{,.{{{{.{{(.{{{{{{,.,((((((((((((((((((..,...(((((,.{((.{{...((((((.{..((...))..}.))))))},.))})))))...,..))))).)),}))))))))).,.,...,))))}},..,.}}}.}))),|})}}}||{{||,.|||,,,,..,,)),,}))})}})})),,}||.,}|||,,...})))))}}..,,))))))))...}},,))))((.....))