Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTPN14_0006300

Sequence Length

218 nt

GC Content

0.3807

GUUGAAUGUCUUCAUAUGCUUCUUAGCUGUGUGUCUUUCAGCUAUAAAUUUUCCAUUUUUCUAGUUUCUGAUCGAUUAUUGAGAUUUCUUUGAUACUAACUUUUUUUGUCUGUUACAUAUGUUGCAAGUAUUUUCCUCCAGGUUGUUGUUUUCUUUCUUUAUUUCUUCCCCCCGACCCCCCACCGCUGCCCCAAUAGAGCUCAAUUUCUGGAGACCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-24.67 kcal/mol

Ensemble Metrics

Free Energy: -28.94

Frequency: 0.0010

Diversity: 38.29

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((.(.(..((((.(((....))))))).).).))))))(...................((((((............)))))).....((((((.........(((.....))).........))))))...(((((((..((((..((((.........................................))))..)))).)))))))....)

Thermodynamic Ensemble Prediction

((((((.(.{..((((.(((....))))))).).).))))))(...................{{{,{{.,{..||.....}}))},.....||{{{{,,,......,|,.,{{.||....}}.}}}}}}},,...(((((((..((((..{(((.........................................))))..)))).)))))))....)