Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0000400
Sequence Length
250 nt
GC Content
0.3920
GAUUUAUUAGGAGAAAAACCUUCCCGGAAGCUGCAGAAGGACAAAUACAGAAUCCGUGUCUGGGAGAAACCUCGUGGCCUGGUCUCCAUUAUUUGAGAUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUACUUUAAGUGGAGGCUGAAUCAUCUCCCCUUUGAGCUGCUUGGCACGUGGCUCCCUUGGUGUUCCCCUUUUACUGCCAGGACACUGAGAUUUGGAGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-46.43 kcal/mol
Ensemble Metrics
Free Energy: -50.87
Frequency: 0.0007
Diversity: 46.10
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((....((((......)))).((((..(((..............)))..)))).(.(((.(((....))).))).).((((((((((....(((........................................................)))..))))))))))))))).(((((.....(((((((.......))))))).((((((((((..............))))))))))....))))).
Thermodynamic Ensemble Prediction
(((((....((((......})))|((((..(((..............)))..)))).{|{|{,({{....))).}))}..{(((((((({....(({........................................................}}).,))))))))))))))).(((((.....(((((((.......))))))).(((((((({(,.........}...))))))))))....))))).
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