Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PVT1_0000700

Sequence Length

250 nt

GC Content

0.4160

UUCUUUUGUAUCUGGCCGGUUAACACAGGGCUUCAUAACAUGGGGUCGGCUGUUAUUAAGCAACAGUGGUUUCCGGUAGCUCACUGACUUUGCCCUCUCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCUGCCAACUUCCUUUGGGUCUCCCUAUGGAAUGUAAGACCCCGACUCUUCCUGGUGAAGCAUCUGAUGCACGUUCCAUCCGGCGCUCAGCUGGGCUUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-50.50 kcal/mol

Ensemble Metrics

Free Energy: -53.91

Frequency: 0.0040

Diversity: 48.25

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.............(((((....(((((((((((((.....((((((((..(((.....((((((((((((......))).)))))...))))...............................................................((((((...(((...)))...)))).))..))).)))))))).....))))))).)))).))..........))))))((((((...)).))))

Thermodynamic Ensemble Prediction

{......,..,,.{((({(....{{((({(((((((.....((((((((..{({.....((((((((((((......))).)))))...))))...............................................................,{((((...(((...)))...)))).))..))).)))))))).....))))))).}))).}}.......,..}|}}|}||,,||}}})},.))}