Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0000900
Sequence Length
218 nt
GC Content
0.3853
GUGGAAGUUUCAGUGAGUCGAGAUGGUGCCACUGGACUCCAACCUGGUCAACAGAGUGAGCCUGACUCUGAUGAUAGUAAUAAAUAAUAAUGGUAGCUUCUAUUUAUUGUUUACUACUAUGUGCCAGACACUAUUCUAGGUGCUUUUCAUCAAUUAGCUCAUUUCAUCUUCGUUAUAACCCUAUGUUCUAAGUACAGUCAUGUACCACAUAAUGAUGU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-51.40 kcal/mol
Ensemble Metrics
Free Energy: -55.38
Frequency: 0.0016
Diversity: 59.72
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((....(((((((.(((((((.((..(((((.......(((((((.((((((.......)))))).))((((((.(((((((((((((......))).)))))))))).))))))..))))).......)))))..))...)))))..)).)))))))....))))....................(((((....))))))))(((....)))
Thermodynamic Ensemble Prediction
(((((((.,.,(((({((,,,{,{{|.||}}|||||,,},,..((({,,,.|||(((,{,..{,|}}}||,||((((((.(((((((((((((......)))})))))))))).)))))){{|||||,......))),)}}))...})))),.)),)))))))....}}}}..,{.,,,.....},.....(((((....))))))||((,...,)))
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