Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0001000
Sequence Length
250 nt
GC Content
0.4200
GCCUUGGGAGACCUUUACCUUUUCAGUGCCUCUAAGACAGGGUCAGAGCAGUUUGGUGACAAAGUGGAAGUAAACCAUGGGUGAAAAACAGCUCUGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCUGCCAACUUCCUUUGGGUCUCCCUAUGGAAUGUAAGACCCCGACUCUUCCUGGUGAAGCAUCUGAUGCACGUUCCAUCCGGCGCUCAGCUGGGCUUGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-53.48 kcal/mol
Ensemble Metrics
Free Energy: -57.43
Frequency: 0.0016
Diversity: 47.07
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((..(((((((((..(((((.((...........)).)))))((((((.((((..(.((...((((.......))))..)).).)))).))))))((((...........................................................))))..))))))))).(((((((((...(((..((....))..)))...((((...)))))))))))))..))).((((((...)).))))
Thermodynamic Ensemble Prediction
(((..(((((((({..{((({.{{,{.....|,..}}.})))}((((((.((((..{.((...((((.......))))..)).}.)))).)))))){({,...........................................................}}},..))))))))).(((((((((...{{{,.({....||..}}},..(({{...}))))))))))))..))}.{{{{||,,,))},)))
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