Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0002100
Sequence Length
250 nt
GC Content
0.3440
GCCUGAUCUUUUGGCCAGAAGGAGAUUAAAAAGAUGCCCCUCAAGAUGGCUGUGCCUGUCAGCUGCAUGGAGCUUCGUUCAAGUAUUUUCUGAGCCUGAUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUCACUUUUUAUUUUAGAAUCAAGAGAUGCAUAUGCAGGUUUGUUACAGAGGUAUAUGGGAUGCGGUUGAAGUUUGGAGUAUGAUUGAACUCAUCACGCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-38.10 kcal/mol
Ensemble Metrics
Free Energy: -42.42
Frequency: 0.0009
Diversity: 76.09
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.........(((((....(((...............)))....)))))).))(((((((((((((.((((...))))..(((((((.(((..((((...............................................................))))..))).)))))))((((((..((.....))....))))))...)))))))))..((...((((........))))...))))))
Thermodynamic Ensemble Prediction
,((,,(((({{{{{{({..,|||||||.....,,,,{|,|}}....|}}}|{,||(({{{({(((((({{{{(...}}}}..({{{(((,(((..((((...............................................................))))..))).))))))),||})))},|..,..,}},}))))),,))..|{{||,({,,(({{,{{,,....,}})))))}.,.)))),
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