Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0002400
Sequence Length
250 nt
GC Content
0.2560
AUUGCACCACUGCACUCCAGCCUGCGUGACAAACUGAGACUCCAUCUCCCAAAUAAAUAAAUAAAUAAAUAAAAGAUAAUAUUACCUACCCCAUGAGUUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAUGAGGUGGCAUGCUUUGCUUUGGAUCAUUGUCUUUAUUUUAUUUUAUUUUGUUUAUUUAUUUAUUUAUUAUUUAUUUUUUGAGAUGCAGUCUCGCUCU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-40.65 kcal/mol
Ensemble Metrics
Free Energy: -45.13
Frequency: 0.0007
Diversity: 55.66
Structure Visualization
Structure Prediction
MFE Structure Prediction
...((..(((.(((........)))))).......((((((.((((((...(((((((((((((((((((((((((((((..(.((((((.((((.......................................................)))).))))(((.....)))...)))..)))))))..............))))))))))))))))))))))...........)))))).))))))))...
Thermodynamic Ensemble Prediction
.{(((({((,.((......}}.)).))).}}}..{((((((.((((((..{(((((((((((((((((((((((((((({....,{{(((.((((.......................................................)))).)))|(((.....)))...|||,.}}})))),.............,})})))))))))))))))))),,,}}}}}...)))))).)))))))....
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