Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0003800
Sequence Length
250 nt
GC Content
0.3880
AGCAGCUUUAAUUGCCUGUGUGGGAGAUUCAGGGCCAGCAGCUGCAGCUUCCCUUUCCCUGCCUCUGACUUGCCAGGUGAGUUUAGAUGAGUUCCUUGCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAUCUGUUAACACUUGAUAUACCCAAUAAAAGCAGUGGUUGUGCCAGUGCUGAUCUGUCUUGAUGUGAAUGUGAACAAUGGGAACCUGAGCUGAGCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-45.40 kcal/mol
Ensemble Metrics
Free Energy: -49.95
Frequency: 0.0006
Diversity: 74.31
Structure Visualization
Structure Prediction
MFE Structure Prediction
....((((.....(((((.((((((((..(((((..((.(((....)))...))..)))))..)))..)))))))))).(((((((....((((((.......................................................((...((((((...))))))...))......((((.((((...)))).)))).(((......)))((........))...)))))))))))))))))..
Thermodynamic Ensemble Prediction
.{(,((((,,,{{,(((,.,,|||,|},,,||||,.,||,(({.{,|||,..},{{|||,}.,||{{{{{{((,,,)))}||||}|}.,,(,{(({......................................................}||}.,|(({.{{{,{|.{{{{...,......((((.((((...)))).))))..........,))}}.}},}}.,))}..))))),,,))))))}))..
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