Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0004100
Sequence Length
177 nt
GC Content
0.3955
GUGGUGGUUCAAAUGAAAUUUCAGCCUUACCCUUUGUAGUUUUCUACGUAAUAAAUCCUAACAUCUGUGAUUAAGGUGACAUAGGUUUUUUUGAGAAAGGCUUUGAUUUCUUGCUUGCAUGGAUGGUUAAUACUCCAGGCUCUUCAGGGUGAUUCUCGCCCUCUUGUUCUGUAGCUU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-33.20 kcal/mol
Ensemble Metrics
Free Energy: -37.69
Frequency: 0.0007
Diversity: 45.74
Structure Visualization
Structure Prediction
MFE Structure Prediction
.....((((((...((((((..((((((.......((((....)))).(((.(((.((((.(((((.......)))))...)))).))).)))...))))))..))))))......((.((((.(.......))))).)).....(((((((...))))))).......)).)))).
Thermodynamic Ensemble Prediction
,.,((({{,{{,..((((((..((((((.,....{((((....))))}.{,.{({.((((.(((((.......)))))...)))).}}}.},}.}.))))))..)))))),,,...,|,||||,{,,,...}}},)(((|,,...(((((((...)))))))...}...,}.)))),
Back