Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0004800
Sequence Length
243 nt
GC Content
0.4650
AAUCCUGUUACACCUGGGAUUUAGGCACUUUCAAUCUGAAAAAAUACAUAUCCUUUCAGCACUCUGGACGGACUUGAGAACUGUCCUUACGUGACCUAAAGCUGGAGUAUUUUGAGAUUGGAGAAUUAAGAGCCAGUCUUGGUGCUCUGUGUUCACCUGGUUCAUCUGAGGAGCUGCAUCUACCCUGCCCAUGCCAUAGAUCCUGCCCUGUUUGCUUCUCCUGUUGCUGCUAGUGGACAUGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-56.30 kcal/mol
Ensemble Metrics
Free Energy: -61.94
Frequency: 0.0001
Diversity: 83.91
Structure Visualization
Structure Prediction
MFE Structure Prediction
((....((.(((...((((((((((((.(((((...))))).....((..(((.(((((....))))).)))..)).......((((((.((((((...((((((((((((..((((((((...........))))))))))))))))).))).....)).)))).))))))...(((.......)))...)))).))))))))....)))..))))(((.((((..........)))).)))
Thermodynamic Ensemble Prediction
((....,..{((...((((((((((({.(((((..,|}}}|...,.({..{{(,(({{(,...}}|||,||}..}}....,,}|||{{{.|||{{{.,.||{,{((({{||,,{(((((((...........))))))))))))))))|,|||,,..,|||,||}.}}||||{{.(({,,,....,||...}))}.)))))}}},...)))..)}))|||.{{{{|{,,,,)))})))).)))
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