Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0005600
Sequence Length
256 nt
GC Content
0.4219
GCCAACAGAGAUUUUGAGAAACACAUUGAAGGAUCUGUUAACACUUGAUAUACCCAAUAAAAGCAGUGGUUGUGCCAGUGCUGAUCUGUCUUGAUGUGAAUGUGAACAAUGGGAACCUGAGCUGAGCAGUUAAUGCUAGGGUGACAGAAACUGGACCUCUCCCAAGACAUGUGACAGAGUAAUACAGCAGCCAACUUCUUCGCCAAAUUAAAGUUUUACAAGAUUUAACCUGUCAUCAAGACCUGGGAUUUUGGUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-52.50 kcal/mol
Ensemble Metrics
Free Energy: -57.92
Frequency: 0.0002
Diversity: 60.84
Structure Visualization
Structure Prediction
MFE Structure Prediction
...((((((..((((((........))))))..))))))..((((....((.((((.....((((.((((...)))).)))).....(((((((((......((((...(((((((.....((.((((.....))))))(((((.((((..(((..((((..((.......))..))))...........)))..)))))))))........))))).))...))))......))))))))).))))))...))))
Thermodynamic Ensemble Prediction
...((((((..((((((........))))))..))))))..((((.,,.{{.((((.....((((.((((...)))).)))).....(((((((((....,,{{,{,..{((((,..,,.{{{,{(((.....}))}.|{({,{{({.,.,||{.,||,|})}}.....}||||,,||||.......,.,}}},,))}}))}),......,,|||}..,,.,,})},...,,.))))))))).)))))),,.))))
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