Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0005900
Sequence Length
278 nt
GC Content
0.4029
AUUUUAUUUUUCUUUACCAUAGGCCAACAGAGAUUUUGAGAAACACAUUGAAGGAUCUGUUAACACUUGAUAUACCCAAUAAAAGCAGUGGUUGUGCCAGUGCUGAUCUGUCUUGAUGUGAAUGUGAACAAUGGGAACCUGAGCUGAGCAGUUAAUGCUAGGGUGACAGAAACUGGACCUCUCCCAAGACAUGUGACAGAGUAAUACAGCAGCCAACUUCUUCGCCAAAUUAAAGUUUUACAAGAUUUAACCUGUCAUCAAGACCUGGGAUUUUGGUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-52.20 kcal/mol
Ensemble Metrics
Free Energy: -57.80
Frequency: 0.0001
Diversity: 78.56
Structure Visualization
Structure Prediction
MFE Structure Prediction
(............)(((((.(((((((((((..((((((........))))))..)))))..............((((.....((((.((((...)))).)))).(((......)))((........))..))))...(((.(((.((((.....))))..)))..)))....))).))).(((((.(.(.((((((((.((............(((((.............)))))............)))))))).)).).).)))))...)))))
Thermodynamic Ensemble Prediction
(............)(((((.{{,{{((((((..((((((........))))))..)))))}.....,,,.......|,.....((((.((((...)))).))))..,,.((((({{(({....,,,.|,..{{{{{,.{{{.{({.{(((.....}))).,|||,,|||...,|||.}}}.|||||.,.,.|{{{{{{{,|{.........,,.|,|||,,},}}.......||}}},.....,,}}},,,}}}})))))})}).}))),...)))))
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