Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0007400
Sequence Length
250 nt
GC Content
0.3560
AUGUCUGCAACCAAGUCAUUAUAACACAGAAGGGACCUUGCAGCCAUUGUGUCUUUGUGCUCAGGUACUGUCUGAGGGAGGGAAGGGAGGCAGAAGGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUAUGUUCCAUUGAAGACCUGGAAAACAUGUUAAAUAAAAAUGCUUUGCCACAGCUGACCUAUGUCUUCUGGCUUGUACCCCACAACAUCUUAUCUAAUGG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-37.20 kcal/mol
Ensemble Metrics
Free Energy: -42.08
Frequency: 0.0004
Diversity: 53.92
Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.((.................((((((.((.((..((....))..)).))))))))((((((.....))))))...(((..(.(((.(((((((.....................................................(((((((((.........))))..)))))............(((.......))).........))))))).))).)..))).))))))((........))
Thermodynamic Ensemble Prediction
((((.{{....,,,|,,.......((((({{((.((..((....))..)).))))))))((((({.....}))))){,,(((..(,(((,(((((({.....................................................,((((((((.........))))..}))}}............{{|,..,...,)),..,,,.,.))))))),))),}..)}).,.))))((........))
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