Sequence Details

BLAST PRIMER
Symbol
hsa_PVT1_0008200
Sequence Length
250 nt
GC Content
0.3840
ACAAACCAGGAGGAUUUCCACAGGGAAGCUGAAAGGGGAAAACAACAGGAUCCUAUCUAUAAGCCUAUUAGAAACCGUUAGAGAAUGAUUUCAUGAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAAGAGGAUCACCCCAGGAACGCUUGGAGGCUGAGGAGUUCACUGAGGCUACUGCAUCUUGAGACUCAGGAUGAAGACCCAGCUUGGGGCUGUCAAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-41.40 kcal/mol
Ensemble Metrics
Free Energy: -46.76
Frequency: 0.0002
Diversity: 70.77
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((..((.(((.....)))...((((..(((....(......)..)))..))))................((((.((((....)))).))))...........................................................((....))......(((((....)))))((((((.((..(((((((((.((.(........))).)))))..))))..)))))))).))..)))(...)
Thermodynamic Ensemble Prediction
(((..(({((,{{.,{{{{...{|||..||{...,{|,....}..,,},,)))}.,|,...,{{{{..,|{{{{.({((.,..|}}}.}))).,.........................................................{{....}}.||.{{(((((....))))),|||||,||.,|||.{{{|||||.(,.(((((((|...)))))))),)}.)))}})))})}..)))(...)
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