Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RNF169_0000900

Sequence Length

339 nt

GC Content

0.3894

AUUUGCAUAUUAUCAUAGUAGAGAGGAAGAAAUUGAUGGUGCUGGAGAGAAUGGAGGAAAUGGAAUGAGCUAAGUCAAUGAAGAGGUAAAGGAAGAUGAGGUCUGAACACCUGUGGAGACUUUAUAUUCAGAGCACCAAUCAAAUUAAGCAAGCCUGGGGAACUUCGUGAGGAAUAUGAAAGCUUGAGAAAGCUGAGAGAAGAAAAGUUACAAGAGGAAAAACCCUCUGAAGAUCAAAUCCACAAGCUGUUACCAGAGGAUACAGAAACAGGGAAAAGGAAAAUGGAUGAACAGAAAAAAAGAGAUGAACCAUUAGUACUGAAAACAAAUCUGGAACGU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-50.60 kcal/mol

Ensemble Metrics

Free Energy: -58.06

Frequency: 0.0000

Diversity: 72.55

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((.((((((((((..................)))))))).)).)))..(((..(((..((......(((.(((...(((...(((....(((.(((((((((..((....))..))))))))).))).....)))..))).))).)))...(((.(.((...)).).)))........(((((....)))))..................(((((......)))))..........(((.....((((..((...))..))))......))).......(((((.......................)))))...........))..)))....)))

Thermodynamic Ensemble Prediction

.(((((,({{,.,,|||}}}},.,,,....,.(((((((((((.................,,,..,...}},..))...............(({.(((((((((..((....))..))))))))).)))..)))))),,)))).,,...,...({(.(.({..,}},),)}}..,,},..(((((....))))).............,,...(((((......))))).....},...{((.....((((..((...}}..}}}}......}},.......{((((.,...,.............,...)))))..,.}}.....,...)})}...},.