Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RNF169_0001000

Sequence Length

250 nt

GC Content

0.3520

UGAAAAGACACCGAGCAAAAUCAGUAGAGGGAGAAGGUGUGUGGGACAAAGUCUGGGGAAAACCCAUCACAAGCUUCUGAAGUCCUCUCUCAGUGGAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACAAGCUGUUACCAGAGGAUACAGAAACAGGGAAAAGGAAAAUGGAUGAACAGAAAAAAAGAGAUGAACCAUUAGUACUGAAAACAAAUCUGGAACGU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-31.00 kcal/mol

Ensemble Metrics

Free Energy: -34.65

Frequency: 0.0027

Diversity: 29.60

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.....)((.((((......((((((((((((((((.(.((((((((...))))(((.....)))..))))).)))))....)))))((((....))))...................................................((.....((((..((...))..)))).....)).........(((((.......................)))))..)))))).......)).))...))

Thermodynamic Ensemble Prediction

(.....)((.((((......((((((((((((((((.(.(((((({{...}}}|(((.....)))},))))}.)))))....)))))|(((....))),...................................................((.....((((..((...))..)))).....}),........(((((.,...,.............,.,.)))))..)))))).......)).))...))