Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RNF169_0002800

Sequence Length

366 nt

GC Content

0.4536

CUGAGAGAAGAAAAGUUACAAGAGGAAAAACCCUCUGAAGAUCAAAUCCACAAGCUGUUACCAGAGGAUACAGAAACAGGGAAAAGGAAAAUGGAUGAACAGAAAAAAAGAGAUGAACCAUUAGUACUGAAAACAAAUCUGGAACGUUGUCCUGCACGUCUCUCAGAUUCAGAGAAUGAAGAACCUUCUCGAGGCCAGAUGACACAGACACAUCGCUCGGCAUUUGUUUCCAAGAACAACUCCUACUCCUUAGCUUUCCUGGCAGGGAAGCUAAACUCCAAGGUGGAAAGGAGUCAGAGCUGUAGUGACACAGCCCAGGAAAGAGCGAAGAGCAGAGUCAGAGCAGUUCCAGGCAACAAAGCCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-85.00 kcal/mol

Ensemble Metrics

Free Energy: -91.31

Frequency: 0.0000

Diversity: 74.73

Structure Visualization

Structure Prediction

MFE Structure Prediction

((..((((((..........(((((......)))))..........(((.....((((..((...))..))))......))).......(((((.......................)))))....((((......(((((((((((.((...)))))).)).)))))))))............))))))..))(..((((.........))))....(((.((((((.((..((((..(((..((((.(((((((((((...)))))))))))(((((..........)))))..(.(((((......))))).)........((.....)).))))..)))..))))..)).)))))))))..)

Thermodynamic Ensemble Prediction

((,,(((({(....,,,...(((((......))))).....,....(((.....((((..((...))..))))......)))..,{{{.((((,.....{{,,..........,...}}}}}....||,.......,||||{,{||||,|,,,,,})}),))})))}}||||,,{,.|......)))))),,}}{..((((.........))))}||.(((.((((((.((..((((..(((..((((.(((((((((((...))))))))))){((((..........)))))..{.(((((......))))).}........((.....)).))))..)))..))))..)).))))))))).,)