Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RNF20_0002300

Sequence Length

316 nt

GC Content

0.4873

GUGGAAUUGCGGAGUGCAGUGGAGCAAGUCGUUAAGGAAACUCCAGAAUAUCGCUGCAUGCAGUCACAGUUCUCCGUCUUGUAUAAUGAGAGCCUACAGUUGAAAGCACACUUGGAUGAGGCUCGGACCCUGCUUCAUGGCACCAGAGGAACCCACCAGCACCAGGUUGAGCUUAUUGAGCGAGAUGAGGUUAGUCUUCAUAAGAAGCUGAGGACUGAAGUAAUUCAGCUAGAAGAUACAUUGGCCCAGGUCCGCAAGGAGUAUGAAAUGCUGAGGAUAGAAUUUGAGCAGACCCUUGCUGCCAAUGAACAAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-83.50 kcal/mol

Ensemble Metrics

Free Energy: -90.67

Frequency: 0.0000

Diversity: 84.25

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((((((..((.((((.((.(((..(..(((..(((...)))..)))..)))).)))))).)).))))))))(..(((((.((.((.((((((.((.....(((....)))...))))))))(((((.((((....((..((...))..))....))))((..(((..((((...))))..)))..))((((((((((........)))))))))).........(((((........)))))...)))))((((((.((......((((.((........)).)))).))))))))...)).)).)))))..)

Thermodynamic Ensemble Prediction

(.(((((((..((.((({.((.(((..{..(((..(((...)))..)))..,))).)))))).)).)))))))}{,,((({{....,,.((((((.((.{{.,{,{....})).},)))))))){{|||{(((({{,{{||,.,...||..,|..,|,,,{((..(((..((((...})))..)))..))|{((((((((........))))))))}|.,,..}}}.|||,|,,..,.|.|||||...}}}}}((((((.({......((((.((,......,)).)))).}))))))).}})),)).}}})),,)