Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RP5-837M10.4_0000300

Sequence Length

373 nt

GC Content

0.3244

GUGUAAAUUUAACAAAAAAGGACUUGCAUCCAGAAAACUACACAAUGCUGAUGAAAGAAAUCAAAGAAGAUCUAAAUAAAUGAAAAGACAUAUCAUGUUUAUGGAUUAGAAGACUCAACAAUAGUAAAGAUGUCAAUUCUCCCCAAAUCGAUAUAGAGGAUUAACAUACUUCCUAUUAAAAUCCCAGAAACAUUAUCUGUAGAUUUAGACAGGCUUACUCUAAAAUGUAUAUGAAAAGGAAAAGAAAGUGGAAUUGCUAAGAAUAUUUUGUUAAACAAGGAGAAAGUGGAAGGAAUCACUCUUCCAAUAUUAAGGCUCACUAUAUAGGUCCAGUAAUCAAGAGAGUGUGGCAUUGAAGGAAGGAGACACAUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-49.80 kcal/mol

Ensemble Metrics

Free Energy: -58.16

Frequency: 0.0000

Diversity: 84.10

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((...((((((((((.....((((((((((................((((.......)))).....((((((.....((((.........)))).....))))))...................(((((((.(((((((..............))))))).)))).)))(((.((.(((((.((((.......))))..))))).)).)))..(((........)))...................))))..))).)))....)))))))))).........((((........))))(((((....((((.(((((((.....(((......))).....)))).))).)))).)))))...))))....

Thermodynamic Ensemble Prediction

((((...{(((((((((.....(({(((((((.....,,.........((((.......)))).....{{((({.....{({{.........}}||{|||.}|||||.{,....},...{{(((..({{((((.(((((((..............))))))).)))).})).))))}..||||,{{{{,,,,,..}|||{,,||||{||.,|,..,,|}}},...,,}},..,....,..........))))..))).}))..,.)))))))))}.........,{(((,,,....}}})|||||,...{(({.(((((((.....(((......))).....)))).))).}))}.}}}}}...))))....