Sequence Details

BLAST PRIMER
Symbol
hsa_SETDB1_0004800
Sequence Length
199 nt
GC Content
0.5075
ACCCGGGGCUUGAUAUGUUACCCAGGCUGGUCUUGAACUCCUGGGCUCAAGCUGUCUACCUGCCUCGGCUGCCCAAAGUGCUAGGAUUACAAGUAUGAGCUACCACAUCCAGCGUAUAGUCAGUUUUCUUUAAAACCCAGACCUGGCCAGGCACAGUGGCUGACAUCUAUAAUCCCAACACUUUAGGAAGCUGAGACAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-56.40 kcal/mol
Ensemble Metrics
Free Energy: -60.24
Frequency: 0.0020
Diversity: 20.68
Structure Visualization
Structure Prediction
MFE Structure Prediction
....(.(((((((.......((((((..(((.....))))))))).))))))).)....(((.(((((((.((.((((((...((((((..((.(((((((((.....((.(.((...(((.(((((....)))))...)))...))).))....))))))..))))).))))))...)))))).)).))))))).)))
Thermodynamic Ensemble Prediction
....{.(((((((.......((((((..({{.....}),)))))).))))))).}....(((.(((((((.((.((((((.,.((((((..,(..(.((((((.....((.(,{{...(((.(((({....}))))...))).,,)),.))....)))))).,.}},}.)))))).,.)))))).)).))))))).)))
Back