Sequence Details

BLAST PRIMER
Symbol
hsa_SHKBP1_0000800
Sequence Length
283 nt
GC Content
0.6007
CAUCUCCCUAAGUCCCAGCCUUUAAGUCCUCCUGUUGCAGUUCGUCGCCUGCAGCUUCGAGAGGAGUUGGAUCGAUCUUCUUGUGGAAACGUCCUCUUCAAUGGUUACCUGCCGCCACCAGUGUUCCCAGUGAAGCGGCGGAACCGGCACAGCCUAGUGGGGCCUCAGCAGCUAGGAGGACGGCCAGCCCCUGUCCGACGGAGCAACACGAUGCCCCCCAACCUUGGCAAUGCAGGGCUGCUGGGCCGAAUGCUGGAUGAGAAAACCCCUCCCUCACCCUCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-92.00 kcal/mol
Ensemble Metrics
Free Energy: -97.56
Frequency: 0.0001
Diversity: 79.80
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.((.....(.((((((.....((((((...(((((((........)))))))...((((((((((....(((.....)))....))).)))))))....((((.((.(((((...((.((....)).))..))))))))))).(((..(((.((.(((((.((....(((.(..((((((.......))))))..)..))).....)).))))).....)).)))..))))))))))))))).))))))((((.((((...........))))...))))
Thermodynamic Ensemble Prediction
(((.{{,.,..(.{{{{((.,..,({(((({,.(((((((........)))))))...|,|||||,|||,,,{,,{....,.}.|}}..},)))}}},...,((((.{(,(((((...((.((....)).))..)))))))))))}(({..(((.,{.{{(((.{(.{,.(({.(..((((((......,)}))))..),,}||.....}},))))).....,},))}..}))))))))))))))}})})))((((.((((...........))))...})))
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