Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SLC24A2_0002000

Sequence Length

483 nt

GC Content

0.4803

CUUUCGAGUCUGUUGCCAAAGAAUCUGCCAAUAAAAGCUUACAUUUGUUGAGCAUUUACCAGGUGCCAAGACCCUCUAUAUGAAUGAUCUCCUUUCAUCUUCAAAAUAGCCUACGAGCCAUCUGCAGCCAGGGACAAGGAUGAACCAACUCUACCGGCUAAGCCGCGUCUCCAGCGAGGUGGAAGCUCUGCCUCCCUCCACAACAGUCUCAUGAGGAAUAGCAUCUUCCAACUCAUGAUACACACCCUUGACCCACUCGCCGAAGGGAGGUUCAGAGAAAAGGCUUCAAUUCUCCACAAGAUCGCCAAGAAGAAAUGUCAUGUGGAUGAGAACGAGAGGCAGAAUGGGGCUGCCAACCACGUGGAAAAAAUUGAGCUUCCAAACAGCACCAGCACAGAUGUUGAAAUGACACCAUCCAGUGAUGCUUCAGAACCUGUACAAAAUGGAAAUCUCUCCCACAACAUUGAAGGUGCAGAAGCCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-108.40 kcal/mol

Ensemble Metrics

Free Energy: -119.91

Frequency: 0.0000

Diversity: 153.21

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((((((.((.........((((((((((........))))))).))).......(((((..(((...)))...((((.(((........)))))))...(((((...(((.......((.((........)).))......)))....))))).(((.(((.....))).)))((((((((........(((((..((((((((((((((......)))))...(((.(((..(...(((((.............))))).)..)))))).....(((((..(((((((((.((((........))....)).)))))).))).....)))))...)))))))))........))))).......)))))))).....))))).)))))))).)))))............))(...(((((...((((.........(((......)))...........))))...)))))...)

Thermodynamic Ensemble Prediction

{((((({(((((,,((.........((((((((((.,....,.))))))).))).,,....{(({,..,,}},,{{,...,{{{,{{{,,,,,{||}},,}},....,{{,,..{{{{,.{{{{,,({,.(((.(((((.,{..........,{((((...)))).}}....,|.((((((((...|))))))).}|........((.(((((((,,........},,...})))))).)).,,.))))).)))..,.},.,,}))),)))))}))}...,||||{{..,((((((((.((({........}....})).)))))).))}...},},|||||,.,,|,,)}}}}......,|||{{......,.,,))))}....|||||.}}}}}}||,|||}},.,......,,.|}|,.,(({{(.,.{{{{,.......|(||......,,}..,,,,,}},.}))),}.)))))...}