Sequence Details

BLAST PRIMER
Symbol
hsa_SMARCC1_0004800
Sequence Length
405 nt
GC Content
0.4123
GCAGAAAAUAAAGUGGAAAAUGAAACGGAUGAAGGUGAUAAAGCACAAGAUGGAGAAAAUGAAAAAAAUAGUGAAAAGGAACAGGAUAGUGAAGUGAGUGAGGAUACCAAAUCAGAAGAAAAGGAGACUGAAGAGAACAAAGAACUCACUGAUACAUGUAAAGAAAGAGAAAGUGAUACUGGGAAGAAGAAAGUAGAACAUGAAAUUUCCGAAGGAAAUGUUGCCACAGCCGCAGCAGCUGCUCUUGCCUCAGCGGCUACCAAAGCCAAGCACCUGGCUGCAGUGGAAGAAAGAAAGAUCAAGUCCCUGGUAGCUCUCUUGGUUGAGACACAAAUGAAGAAACUAGAGAUCAAACUUCGACAUUUUGAAGAGCUGGAAACUAUCAUGGACAGAGAGAAAGAAGCU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-68.30 kcal/mol
Ensemble Metrics
Free Energy: -74.95
Frequency: 0.0000
Diversity: 93.90
Structure Visualization
Structure Prediction
MFE Structure Prediction
...........(((..............((((.(((.....(((.(((((((..(((..(((......((((.........((((...(((.(((((((............((((............))))............)))))))..))).................((..((((...........))))..)).....((((((...))))))(((((.......)))))(((((((........)))))))......((...)).))))(((((((.(((.((........))...))))).)))))..((((.(((........))).)))).))))....)))...)))..)))))))....)))....))).))))................)))
Thermodynamic Ensemble Prediction
((..........((,..........,..,{{,.{((,....,,|,|,,,,{{..,,,.............{{........}|...,,.(((.(((((((............((((............))))............)))))))..))).},,.............((..((((...........))))..)).....((((((...)))))){||{|,.,..},))|||{{((,{({{{,{{,{,}||||{,{...(((({......))))),,,|,||{.,,........}}..,|||,||||||}{((({{((((....,,....},....))))))))},,,..{|||{,,,,,)))}}}.}})....,)),))),}},}.,,},,..,,..)))
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