Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SMARCC1_0014200

Sequence Length

311 nt

GC Content

0.4598

AGCAGUGGGGACUCGUUAAUUACCAAGUUGACCCGGAAAGUAGACCCAUGGCAAUGGGACCUCCUCCUACUCCUCAUUUUAAUGUAUUAGCUGAUACCCCCUCUGGGCUUGUGCCUCUGCAUCUUCGAUCACCUCAGGUUCCUGCUGCUCAACAGAUGCUAAAUUUUCCUGAGAAAAACAAGGAAAAACCAGUUGAUUUGCAGAACUUUGGUCUCCGUACUGACAUUUACUCCAAGAAAACAUUAGCAAAGAGUAAAGGUGCUAGUGCUGGAAGAGAAUGGACUGAACAGGAGACCCUUCUACUCCUGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-75.30 kcal/mol

Ensemble Metrics

Free Energy: -82.33

Frequency: 0.0000

Diversity: 73.77

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((.((((....(((((((....)))))))..(((..((((.(((((....)))))........)))))))..........(((((....))))))))).)))(((....)))((((((...(((((...((((((........((((....)).))........))))))........((.....)).)))))..)))))).....(((((((((.(...(((((.(((((.(....((((((((...........)))))))))))).)).)))))....).)).)))))))((((.......))))

Thermodynamic Ensemble Prediction

(((((((((((((.(((((((....}))))))..(((.,((((.(((((....)))))......,,)}}}}}}..........{{{{|.|,.}}},}{{,....|||{....))},,|}}|}....|,........)))))))))))))(..(((..{{,...(((((((..........))))))}...|||,.,..,},|{|,....(((((((((.{.,.(((((.(((({,(....((((((((...........))))))))))))},).)))))..,.}.}}.))))))).,}},....)))..)