Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SMARCC1_0022400

Sequence Length

196 nt

GC Content

0.4031

GGAACAUUUACGGAUGAGAAGUCAAAAGCUUCCCACCACAUUUACCCAUAUUCUUCCUCACAAGACGAUGGUUCAUGUGAAAUGGAUUUUGGACACUGAUAUUUUCAAUGAAUGGAUGAAUGAGGAGGAUUAUGAGGUGGAUGAAAAUAGGAAGCCUGUGAGUUUUCGUCAGCGGAUUUCAACCAAGAAUGAAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-52.20 kcal/mol

Ensemble Metrics

Free Energy: -55.87

Frequency: 0.0026

Diversity: 22.21

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.((((.(.((((((((.(((...((((((.....((((((((((((.(((((((((.....((.(.((((((.(((((....................))))))))))).).))..))))))))).)))).))))))))......))))))...))).)))))))).).)))))))..)(...........)

Thermodynamic Ensemble Prediction

({{,.((((.{.((((((((.(((...((((((.....((((((((((((.(((((((((.....({.{.((((((.(((((.,.,,,,.{....}.}},,,))))))))))).}.)}..))))))))).)))).))))))))......))))))...))).)))))))).,.))))}}}..)(...........)