Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SMARCC1_0031600

Sequence Length

169 nt

GC Content

0.4024

AACAAUUGUUUGACCAGACCCAACAUCUACCUCAUUCCAGACAUUGAUCUGAAGUUGGCUAACAAAUUGAAAGAUAUCAUCAAACGACAUCAGGGAACAUUUACGGAUGAGAAGUCAAAAGCUUCCCACCACAUUUACCCAUAUUCUUCCUCACAAGACGAUGUGGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-23.40 kcal/mol

Ensemble Metrics

Free Energy: -26.57

Frequency: 0.0058

Diversity: 34.51

Structure Visualization

Structure Prediction

MFE Structure Prediction

((...((((((((......(((((.((....(((..........)))...)).))))).........(((......))))))))))).....(((.........((.((.(((((.....))))).)))).......)))...))(((((.((........)).)))))

Thermodynamic Ensemble Prediction

((,,,((((({(,..,,..{((({.((....(({.....,,...})),.,)}.))))),..,,,..,||,..,,,.||.,}}}}})).,,,.(((.........((.((.(((((.....))))).)))).......)))...))(((((.((,.......)).)))))