Sequence Details

BLAST PRIMER
Symbol
hsa_SMARCC1_0033500
Sequence Length
445 nt
GC Content
0.4247
AAUGGAGAGACUAUCUUUGGGAACAUGGGACUAGGAAGGAGACCGCAAAGUGUUUCAUGGAUUUCAAAGCUGGAGGCGCCUUAUGUCACAUUCUUGGGGCUGCUUACAAGUAUAAAAAUGAACAGGGAUGGCGGAGGUUUGACCUACAGAACCCAUCUCGAAUGGAUCGUAAUGUGGAAAUGUUUAUGAACAUUGAAAAAACAUUGGUGCAGAACAAUUGUUUGACCAGACCCAACAUCUACCUCAUUCCAGACAUUGAUCUGAAGUUGGCUAACAAAUUGAAAGAUAUCAUCAAACGACAUCAGGGAACAUUUACGGAUGAGAAGUCAAAAGCUUCCCACCACAUUUACCCAUAUUCUUCCUCACAAGACGAUGAAGAAUGGUUGAGACCGGUGAUGAGAAAAGAGAAGCAAGUGUUAGUGCAUUGGGGCUUUUACCCAGACAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-94.10 kcal/mol
Ensemble Metrics
Free Energy: -103.26
Frequency: 0.0000
Diversity: 135.19
Structure Visualization
Structure Prediction
MFE Structure Prediction
...((.(...(((.((((((((.((((((((......((...)).......))))))))..)))))))).)))...).))...((((.((((((((..(((.......)))...........))))))))..((((((((((((((((..((((((.....))))...))..))))).((((((....))))))..........((((.((((.......))))))))..............(((((((..........(((((.((((...........................)))).)))))..........)))))))..)))))..))))))((((...((((.((((..(((((.((.......)).))))))))).))))...))))..............(((........)))..((((.......)))))))).
Thermodynamic Ensemble Prediction
..{((.....|||}(((((((,.((((((((......((...)).......))))))))..|||||,,|{|||{(((((((({.{.......}.)))))).)))}...,,,...........,.|((|(({.{((((({({{||{{{{..{{||{{,,,..||}}...}|.,|||}}.((((((....}))))).....,,,,{((((.({{{{{....))))})))),..,,..,,,.,..{((({{(,.,,......(((((.((((.........,{,.......,,,.....)))).)))))..........))))))}..}}},,..}))))}||||...{{{{,({{,,((((((.((.......)).))))))))).})),.,})))}.}}},.....{{{{((.{((((....))))},..}))))}.))))},.,,
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