Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SMARCC1_0036500

Sequence Length

263 nt

GC Content

0.4943

GGCUGGAGUGCAGUAGGGCGAUCAGGGCUCACCGCAGGCUCAACCUCUCAGGCUGAAGUGAUCCUCCCACCCCAGCCUCCUGGAUAGGAUUGCAGGCAAAGUGUUUCAUGGAUUUCAAAGCUGGAGGCGCCUUAUGUCACAUUCUUGGGGCUGCUUACAAGUAUAAAAAUGAACAGGGAUGGCGGAGGUUUGACCUACAGAACCCAUCUCGAAUGGAUCGUAAUGUGGAAAUGUUUAUGAACAUUGAAAAAACAUUGGUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-61.70 kcal/mol

Ensemble Metrics

Free Energy: -69.10

Frequency: 0.0000

Diversity: 91.45

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((.((...(((((....(((((.((..(((((((.....)))...((((((..(((.......)))..))))))((((.(......).))))....(((((((..(..........)..))))))).........((((((((..(((.......)))...........)))))))))))))).))))))))))...))))).))(...((.((((..((((...((((((....))))))......)))))))).)))

Thermodynamic Ensemble Prediction

((((((.(((..,..(((.,,,,{{{{,(({{,.{(({{{,..|||...|)||}}..|}))}),}}}))).)))))){((((.{......}.)))},...,(((((({{...{{{....((({.{(((((((((.{.......}.)))))).))),.).}))......}}}},},(((((((..{((((...)))).}.,...)))))))...{(.,(({,{((((...{{{{{|,,,,))))))......))))))}),)))