Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_STRN3_0005800

Sequence Length

250 nt

GC Content

0.2800

AAUUUGUUAAUAAGUCACACCUACUGAAUUAGCAUAAGCUUCUACAGAUUUUUCACUGCAGCUUCUUAGAGGGAAGAAAACUAUUUGCUAACUUUACCAUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUAUAAAGAACAAAUGUCUGUUUUCUAGGAGUGGAACUUCAACAUUACAAUCUUCUAGACUAUUGCUGCUAAAGACUUGAGACCUACCAUGUUGCCACUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-23.71 kcal/mol

Ensemble Metrics

Free Energy: -27.10

Frequency: 0.0041

Diversity: 59.96

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((..((((((.......(((....(((....)))....)))..........(((((...(((((((..(((((((((((((....(((((.........................................................)))))..))))))...))))))).(((((...)))))...........)))))))......)))))....)))))).))).......((....))..

Thermodynamic Ensemble Prediction

.....(((..((((((.......(((.,..(((....)))....)))..........(((((.,,{(((((({.((({,,,{{{{{{....{{{{{.........................................................,}}}|,,|}}}}}..})))))|||((((({..,,,,}.......,..,))))))),.....)))))....)))))).)))....,,.{|...,))},