Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_STRN3_0006800

Sequence Length

250 nt

GC Content

0.3440

UUUACCCUCUAGAUACGUGAUGAUAUGAGGUCAUAAGGUCAGUUCCAGUCAUUAUGACUUCUCUCUCAUUUACUUGGUCCUCUUCCAUGUAUUUUUGGUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGAUGAUGAGCUGCCCCACAUCCCUUCAGGAAUCAUUAAUCAGUCUAGGUCAGCCUCUACUAGAAUGACUGAUCAUGAAGGUGCAAGAGCAGAGGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-40.60 kcal/mol

Ensemble Metrics

Free Energy: -44.91

Frequency: 0.0009

Diversity: 45.09

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((........(((((...((((((((((((......)).....))))))))))....)))))(((.(((.......))).)))..............................................................((((.((........))))))((((((.((.((((((.(((((..(((....)))..))).)).))).))))).)))))).((....)))))))...

Thermodynamic Ensemble Prediction

.....(((({.{,{,.(((((((...((((((((((,(.{.......}.}.))))))))))....)))),|||.{{|,......|||.}}}....,,,.......................................................((((.((........))))))((((((.(,,((({{,.((({({,((,....,,,..,)),)).))).))))).)))))).((....)))))))...