Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_STRN3_0008200

Sequence Length

344 nt

GC Content

0.3721

AUAAAGAUGACCUCUCCCCAACUGCUGAGGUUUGGGAUGUAGACCAGGGACUAAUAAGUAAACUGAAGGAACAGUACAAGAAGGAACGAAAGGGGAAGAAAGGGGUGAAGAAGAGGAACUCAGUAUAUGAAAUGGAUGAAAGUGGACUUCUUUGACUGAAUCAGUACUGGAGACCCCAAAUUCAUAACUUAAGGCUUUCAUGUCUCAAUAACAUCUUACUCUCUAGAUAGCUCAUCAUGUUAAUACUAAGAUAUAAUUUUACAUGAAAAGAUCCAAGAAAACAUGUUGUCACCAGGAAAUACAGUUGUUUAAAGUGUGACUUGAAGCCAAAUAUCCAAAAUUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-53.60 kcal/mol

Ensemble Metrics

Free Energy: -62.19

Frequency: 0.0000

Diversity: 88.87

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((....(.((((((((((.....((..((((((.....))))))..))(((....)))..((((......))))................))))).....))))).)....(((...)))(((.((((((.(((........((.((((....((((...))))...)))).)))))..)))))))))...(((((.((.(((.((..((((.((...(((...((((((((.((((((....................))))))...)).............))))))....))).....)).)))).....)).))).)))))))...)))(........)

Thermodynamic Ensemble Prediction

(((......,,{(((((((...,.((..((((((,....}}}})),,}}|||....)))..((((......))))................))))}.},,{|},|{{{{...{.((..{(((((((.(((..,((.(.((((.......)))).}}},..)))))))))))).,)))...)))))..}},..((({{{((.(((.{{..{(((.{{...,{(,{.((({{({..((((((.,{..............},.))))))...},,,...,...,.,,)})))}....}}}...,.}},)))).....)).))).)))))))...)))(........)