Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_STRN3_0009400

Sequence Length

383 nt

GC Content

0.4360

GUCCUCUGGUGAUGUUCUUGAGACGUUCAAUUUCUUAGAAAAUGCCGAUGACAGUGAUGAAGAUGAGGAAAAUGACAUGAUCGAAGGCAUCCCAGAAGGAAAAGACAAACAUCGGAUGAAUAAACAUAAAAUAGGUAAUGAAGGUUUAGCUGCUGACCUAACUGACGAUCCUGAUACUGAGGAAGCACUGAAAGAAUUUGAUUUUUUAGUGACUGCUGAAGAUGGUGAAGGAGCUGGAGAAGCACGGAGUUCGGGGGAUGGCACAGAAUGGGAUAAAGAUGACCUCUCCCCAACUGCUGAGGUUUGGGAUGUAGACCAGGGACUAAUAAGUAAACUGAAGGAACAGUACAAGAAGGAACGAAAGGGGAAGAAAGGGGUGAAGA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-76.20 kcal/mol

Ensemble Metrics

Free Energy: -85.16

Frequency: 0.0000

Diversity: 109.54

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((.......(((((....(((((..((((((.....(((((..(((((((.((.............)).)).)).)))..)))))(((......................(((......)))....(((((.....((......))....)))))........((((..((((..((.((((((((((((......)))))))))).)).))..)).))....))))(((.....))).(((((((.((((((.((((................)).)))))))).)))).))).((((((.....)))))).)))(((....)))..((((......))))..)))))))))))....)))))...)))))......

Thermodynamic Ensemble Prediction

.((((((((.((((((,((((..((((({.((((((,....{{,{{.......}|.||.....},}}})}..))),})).)))}.)))))))))),,))).....,...{.{{,.,{{......|}}....,,{{{.....,{|||,,.}}.,,,}||},.{{..{,.((((..,,((.,{{.{(((((((((((......)))))))))).}).}}..,,.,|||..,,,,{((.....))).{(,((((.((((((.(({{{...............)).)))))))).)))).)},.((((((,....)}}})),,..{{{....}}}..((((......))))......}}}}.}}..,}}},......,}}}},....