Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_STRN3_0011400

Sequence Length

426 nt

GC Content

0.4108

CUUGAUAGAGAGUAAGUGCUGCUCUUUUCUUCUGGAUCAUAGACUAUUAGGCCCGGAUUGCAUUUCUACAAGGCGAAAGAAAAGGUCAAGAGAACCUGAAGAAGGACUUAGUAAGAAGAAUAAAGAUGUUAGAGUAUGCAUUAAAACAAGAAAGGUCCUCUGGUGAUGUUCUUGAGACGUUCAAUUUCUUAGAAAAUGCCGAUGACAGUGAUGAAGAUGAGGAAAAUGACAUGAUCGAAGGCAUCCCAGAAGGAAAAGACAAACAUCGGAUGAAUAAACAUAAAAUAGGUAAUGAAGGUUUAGCUGCUGACCUAACUGACGAUCCUGAUACUGAGGAAGCACUGAAAGAAUUUGAUUUUUUAGUGACUGCUGAAGAUGGUGAAGGAGCUGGAGAAGCACGGAGUUCGGGGGAUGGCACAGAAUGGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-89.80 kcal/mol

Ensemble Metrics

Free Energy: -98.40

Frequency: 0.0000

Diversity: 91.60

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((((((.....)))))).....((((.....))))))))))))((((...(((..((((......((..((...((((((((.((((((.....(..(((((...............(((((....(((.((((.............((((((((.((((((.((((..((((((.(((((((....((..(.......)..)).....)))))))..))).))).)))).)))))))))).))))..............)))).))))))))....)))))..)..))))))..))..))))))..))..)).((((.......))))((((((((((((......)))))))))).)).(((((..(.(((...............))).)..)))))))))..))).....))))

Thermodynamic Ensemble Prediction

((((((((((((((.....)))))).....((((.....))))))))))))((((...(((,,((((....,.(,..,,...((((({.,,{{{(((.....,..{((({.,............(((((,....,..}}}}}.............((((((((.((((((.((((..((((((.(((((({....{{.,,.......),.,}.....)}))))),.))).))).)))).)))))))))),,))).........,.,,..|||......}}}....}}}}}..}..}})))}..))..))))))..}}..},.((((..,,{{.}||,{{((((((((((......)))))))))).}}.||..|,.|,||..,,,,{((.....))),|,,..})))})))),.))).....))))