Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_STRN3_0013800

Sequence Length

250 nt

GC Content

0.2720

ACCAGCUUUUGAAAACCCUGAAAAUGGAAAAUUCAGGAGAUUCCCCCCUUAAAAAUGAAGAAAUCAAGUAAGUCUAAGCAAAAUAUCUCCUACUAACUUANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUAUCUAAUUCAGAACCAAAUGGAUCAGUAGAAACAAAGAAUUUAGAACAGAUCCUGAAUGGAGGUGAAUCUCCUAAGCAAAAGGGACAAGAAAUAAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-23.90 kcal/mol

Ensemble Metrics

Free Energy: -27.85

Frequency: 0.0016

Diversity: 42.01

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((.....((.......)).......(((((((((((.((.................((((.(((...((........))...))).)))).....................................................(((((((((........)))))...))))........((((((........)))))))).)).)))))))))...)))))).................

Thermodynamic Ensemble Prediction

.....((((({....{(({......}}....,},((((((((((({((........,,.....,,{(((.(((...{{........}}...))).)))}.....................................................{(({{((({........}))}),.,}}}}........((((((........)))))))).)).)))))))))...},,,))))...............