Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_STRN3_0014500

Sequence Length

373 nt

GC Content

0.4102

UGAAGACGAGGUGUUGCUGUGUUGGCCAGGCUGGUCUCAAACUCCUGGUCUUAAGUGAUCUCCUGCCUUGGACUCUGGAAGUGCUGGGAUUACAGGCCCGGAUUGCAUUUCUACAAGGCGAAAGAAAAGGUCAAGAGAACCUGAAGAAGGACUUAGUAAGAAGAAUAAAGAUGUUAGAGUAUGCAUUAAAACAAGAAAGGUAUCUUCAGGAAGUAGGUUAUACAGAUACAAUAUUAGAUGUACGGUCUCAGCGGGUAAGGUCAUUACUUGGACUAUCUAAUUCAGAACCAAAUGGAUCAGUAGAAACAAAGAAUUUAGAACAGAUCCUGAAUGGAGGUGAAUCUCCUAAGCAAAAGGGACAAGAAAUAAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-77.90 kcal/mol

Ensemble Metrics

Free Energy: -85.00

Frequency: 0.0000

Diversity: 93.25

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((.(((.(((....((..(((((...))))).))))).))).)))))...((((((.((((((((.....(((((((((((((........))))....)))))))))))))))...))...))))))......((((((((....(((......)))......(((((........)))))...............))))))))..(((.....)))...........(((((....((((....(((((((.....))))))))))))))))(((((...(((...(((((.((..................)).)))))....)))...))))).((((........))))..............

Thermodynamic Ensemble Prediction

,.{((((.(((.(((..,.{(..(((((.,.,})}}.}}})).))).)))}}...(((((({{(((((((.....(((((((((((((........))))....))))))))))))))),...}...,}))),......((((((((...,(((...............(((((........)))))..........,},}.))))))))..{{{.....}}}...,|,....,{{{{|,,,.|||||..,|||{{{{.,,,.)))}}|}}}}}}}||}|{(((...(({...(((((.{{.,,.........|||...}}.))))),...)||,,.}}},},|||{........)))},.............