Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_STRN3_0015500

Sequence Length

262 nt

GC Content

0.4008

UUGAGAAAGAAACCAAAGACACAGAGGCUCCCACAGCACCUCAGAAUAGCCAGUUAACGUGGAAGCAAGGCAGACAGCUUUUAAGACAGUAUCUUCAGGAAGUAGGUUAUACAGAUACAAUAUUAGAUGUACGGUCUCAGCGGGUAAGGUCAUUACUUGGACUAUCUAAUUCAGAACCAAAUGGAUCAGUAGAAACAAAGAAUUUAGAACAGAUCCUGAAUGGAGGUGAAUCUCCUAAGCAAAAGGGACAAGAAAUAAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-36.90 kcal/mol

Ensemble Metrics

Free Energy: -42.76

Frequency: 0.0001

Diversity: 69.21

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((..(..............((((...........))))......(((.(((........)))..))).(((.((((((((((.....))))..))))))..))).((((..((......))..)))))..))))))(((((..((((........)))))))).(((((...(((...(((((.((..................)).)))))....)))...))))).((((........)))).............)

Thermodynamic Ensemble Prediction

((((({..,...,,.........({{({{.....,},.}}}}......{{{.{{{...,}}}.})).,|||...,.|||||{{{,,..{{{|||,...}},||..,}}.||||}}||}.....}},,}}},,,,))))))((((({,,,,{.,,,,,}})})))))).(((((...(((...(((((.((.,,,........,}}...)).)))))....)))...))))}.((((........)))}.............)