Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_STRN3_0017700

Sequence Length

250 nt

GC Content

0.2840

UACAUUUUUCUGGUUUUGGUAUUAGGAUAAUGCUGGCUUCAUCACGUGAAUUAGUAAGUGUUCCUUUUGCUUCUGUUUUCUGGAAGAGAUUGUAGAGAAUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUAGAGUAUGCAUUAAAACAAGAAAGGGCAAAAUAUCACAAAUUAAAAUAUGGCACGGAACUGAACCAAGGUGACUUGAAAAUGCCAACCUUUGAGUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-30.00 kcal/mol

Ensemble Metrics

Free Energy: -35.32

Frequency: 0.0002

Diversity: 54.02

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((((.(((((((......))))))).)))).(((.((((((.((((..(((((..(((....((((((((((((((((((.((....)).))))))))..................................................((((.(....).))))....)))...)))))))...)))..))))).......))))))..))))))).).(((((((((..........))))))))).

Thermodynamic Ensemble Prediction

{.{{({.(((((((......))))))).})))(((({(((({,.{{{{..{((((..(((....((((((({{{((((((((.((....)).)))))))).......................................................,......,,,,..,.,},..})))))))...)))..}))),....,..)}}},,..}}},,|{(({(,.{,|,.....}.,.,,,}}})))))))