Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TTBK2_0012900

Sequence Length

248 nt

GC Content

0.4758

GGUCUUGUUCUGUUACCCAGACUGGAAUGCAGUGGCACAAUCAUGGCUCACUGCAGCUUUGAACUCCUAGGCUCAAGCAAUACUCCGGCUUCAGCCUUCUGAAUAGCUAGGACUAUAGAUGCACACCACCACACCUGACUAAUUUUUAAAAUUUUUACGGACGGCAUCUUAUGUUACCUAGGCUGGUCUUGAACUCCUGGCCUCAGGCAGUCUUCCCACCUCAACUUCCCAAAGUUCUGGGAUUACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-60.07 kcal/mol

Ensemble Metrics

Free Energy: -65.90

Frequency: 0.0001

Diversity: 44.57

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.....))((((..(((((((((((((((((((((.((....)))).))))))).............(((((.((((.........)))).)))))((.((.((((((((((...((((((...((...............................))...))))))...))..)))).)))).))..))(((((((....)))).)))..............))))...)).))))))...))))

Thermodynamic Ensemble Prediction

({.....})((((.,((((((((((({(((((((((.((....)))).))))))),,,..,...,...(((((.((((.........)))}.))))}.,.||..{|((((({{,,,((((((...((...............................))...)))))).,,)}..)))}||}||{,...{{{((((((....)))).))),...,,}}}.....})))...))}}))))).,.))))