Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TTC3_0001800

Sequence Length

230 nt

GC Content

0.3652

GUGACAAUGACAGGAAAAUUAGAUGUAGUAAAAGAGAGUGUUUGAGAGCAGAAGCUAUGGCAACUAAAGACUGGAUUUGAAUCCUUCCUAGCUUGGUGACAUGAGCAAAUUACUUGAUUUAAGUGAGCAUUUUCCCAUCUGUACAGUGGAGAUAACGAUAAUUGUGCCUGCUAAGAAGAAUUGCUGUGAAGAUUAGUGAAAUAAUGCAUGUAAAACAUUUGGUACAGUAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.70 kcal/mol

Ensemble Metrics

Free Energy: -40.59

Frequency: 0.0001

Diversity: 64.69

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((.((((..(((((..((((((.((((.....((..((((....(((....)))..)))).))....)))).))))))....))))).(((((......)))))...(((((((...))))))).)))).)).)(((((((((((((..((((......))))..)))))........((((((.......))))))........((((...))))...)))))).))

Thermodynamic Ensemble Prediction

({,({,{,(..(((((..((((((.((((.......{{((((....(((....)))..)))}.))....)))).)))))).,..))))).{|{{,,}.}}{||}}|...(((((((...}))))))|||||,||,|((((,((((((({.,,..{,,...,||||..|},|,........,,||||},.,,}}},),}},,.,})}},|||....}}},,,})))}},))