Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TTC3_0005200

Sequence Length

425 nt

GC Content

0.3741

AUUGCCCUCACGUGGAUGAUUGUGUCUUUGCUGCUGAAUUUAUGAGCAAUGAUUAUGUUCGUGUGACUCAGCUUUACUGUGAUGGGGUGGGUGUGCAAUAUAAAGAUUAUAUCCAAAGUGAGAGGAAUUUGGAAUUUGACAUCUGCAGUAUAUGGUGUAGUAAACCAAUUUCUGUCCUGCAAGAUUAUUGCGAUGCCAUUAAAAUAAACAUCUUCUGGCCACUUCUGUUUCAACAUCAAAACAGUUCCGUAAUAUCACGAUUGCAUCCCUGUGUGGACGCCAACAAUUCACGUGCUUCUGAGAUAAAUUUGAAGAAACUACAACAUCUUGAGUUGAUGGAAGAUAUUGUGGAUUUGGCAAAGAAAGUUGCUAAUGAUUCAUUCCUUAUUGGAGGCUUAUUGAGAAUUGGUUGUAAAAUAGAAAAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-92.70 kcal/mol

Ensemble Metrics

Free Energy: -101.07

Frequency: 0.0000

Diversity: 131.92

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..(((..(((((((((..((((((((.(((.(((((...((((((((.......))))))))....)))))...(((.......)))(((.(((((((......(((((.......((.((((((.((((.....((.((((.((((((.....(((((...((........)).)))))....)))))))))).))......))))..)))))).)).....((((((........))))))....)))))......)))))))))).))).))))).)))..)))))))))((((.((......)).))))...((((((.(((((..........))))).))))))..(((((((......)))))))........(((.....)))))).)(((....(((........)))....)))

Thermodynamic Ensemble Prediction

(,,(((,.(((({((((,.((((({{{,(((.(((((.,,((((((((.......)))))))).,,.)))))...,{{.,,,,{,|{{(((((((,,,{........})))))},.{({{(,((((,{((({....{{,((((.{{{{,,...},|||{{...,}}},,,}}},),))|||{...,}))))}}}|,||......,,,,..}}}},),)).,,..((((((........))))))...,||}}...})))))}})))))}}))).))}}}||||..}|||}}}}|(((({,{......,}|||}}...((((((.(((((..........))))).))))))..{((((((......))))))}...,,},.{{{...,,)))))).},,|,,,.,||,,,.,,..}}}....,,)