Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TTC3_0011400

Sequence Length

250 nt

GC Content

0.3640

AAAUGCACUCGGUGAUGGAAAGAGAGCCACUAUUCUGAAGAACACUUGGCCAAAGGGUCAUUAUCGUUAUUGUGAUGCUCUUUCUAUGCUGGGGGAAUAUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCUGUUCCUCCAGGACGUGCUGCGCGUUCAAGCCAGUCUCCAAAAAAGCCGUUCAAUAGUAUUAUUGAGCACCUGUCAGUGGUAUUCCCAUGUUACAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-48.91 kcal/mol

Ensemble Metrics

Free Energy: -52.93

Frequency: 0.0015

Diversity: 33.70

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((...)))((((((((((...(((.((..(((.((.....(((((....))))))).)))..)).)))...))))))))))..((((((((((....................................................))))))))))(((...((((.((......)))))).))).........((((((((....))))))))..((((..((((.....))))......))))

Thermodynamic Ensemble Prediction

.,,,{(((,.{{|,((((((((((...(((.,{..(((.{(.....(((((....)))))}}.))}..},.)))...)))))))))).{((((((((((....................................................))))))))))|((.,.((((.((......)))))),))}.........((((((((....))))))))..|{|{.,||||,,},.,,,|{,....)))}