Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TTC3_0015700

Sequence Length

380 nt

GC Content

0.3895

GUCGAACAGCAAAUAAGGAUCCAAUUAAAGCCUUUUAUGAAAACAGGGCCUACACACCUAGGAGUUUAUCAGCACCUAUAUUUACUACUUCACUUAACUUUGUGGAGAAGGAAAGAGAUUUCAGAAAAAUUAAUCACGAAAUGGCCAACGGUGGUAAUCAGAAUCUAAAGGUGGCGGAUGAGGCGUUGAAGGUAGAUGAUUGUGACUGUCAUCCUGAAUUUUCACCACCAUCAAGUCAGCCUCCAAAACAUAAAGGAAAACAAAAAUCUCGAAACAAUGAAUCAGAAAAGUUCAGUUCUAGUUCACCAUUGACUUUACCAGCAGAUUUGAAGAACAUCUUGGAGAAACAGUUUUCUAAAUCUUCCAGAGCUGCACACCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-67.70 kcal/mol

Ensemble Metrics

Free Energy: -76.14

Frequency: 0.0000

Diversity: 75.32

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((........................(((((..........))))).........((((.(((....))).))))......((.((((((........)))))).))....(((((((...........(((((.............)))))..............((.(((.(((((((.(.(((((((.((((((.......))))))....))))))).).)).)))..)).))).))...................))))))).......(((((.((((........)))).)))))...)))))((.....((((.((((((((.....((((((((....)))))))).)))).)))).)))).....))

Thermodynamic Ensemble Prediction

(((((.........,,{{...........{{({{.,.,,.....,}|}}.........((((.(({....})).))))..,{..((.((((((........)))))).))..},{{(((((..,.........||........{{{....}))))..,...........(({(((.(((({{(.(.(((((((,((((((.......)))))).,..})))))),).}),))..))).)))|||..........}}.......,}})))}.......(((((.((((........)))).)))))...)))))((.....((((.((((((((.....((((((((....}))))))).))))},))).)))).....))