Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TTC3_0022400

Sequence Length

250 nt

GC Content

0.3880

GCUUAGAUGCCACAGGAACUUUCUUUUCUCGUUAUGGAGCAUCUCUUAAACUGCUUGAUUUUAGUAUCAUGACUUUCCUCUGGAAUGAGAAAUAUGGUCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCCCCGUGACCAGGUCCUCCCAGGGCUCACCCUCGGUGGUUGUUGCACCAUCACCCAAAACCAAGGGGCAGAAAGCAGAAGAUGUCCCUGUGAGGAUU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-46.20 kcal/mol

Ensemble Metrics

Free Energy: -50.79

Frequency: 0.0006

Diversity: 57.87

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((.(((((((.((..((((((...(((((((((((..........))))((((......))))(((((...(((......)))......))))).......................................................)))))))..((((((...)))))).......((((((......)))))).(((........)))((.....)))))))).)).)))))).).)))

Thermodynamic Ensemble Prediction

.....(((.(((((((.((..(((((((({(((,{((((,,..........||||,,{,...,,,}}},,||,,...|||}..}}})))}},..{|||||.........................................................,))))}}(({(({...||||},..||||.((((({.,....}}))}).{{{........)))((.....))}))))).)).)))))).).)))