Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TTC3_0025800

Sequence Length

359 nt

GC Content

0.3538

GGGGAAAUUUCACGGAUUGAAAAGGAGCACCAAGUAUUACAAGACCAACUUCAAGAAGUGUAUGAAAAUUAUGAGCAGAUAAAACUUAAGGGCUUAGAAGAGACCAGGGACCUGGAAGAGAAGUUGAAAAGGCACUUAGAAGAAAACAAGAUCUCAAAGACGGAAUUAGAUUGGUUCCUUCAAGAUUUGGAAAGAGAAAUUAAAAAAUGGCAACAGGAAAAAAAAGAAAUCCAAGAAAGACUAAAAUCACUGAAGAAGAAAAUUAAAAAGGUUUCAAAUGCCAGUGAAAUGUAUACCCAGAAAAAUGAUGGAAAGGAAAAGGAACAUGAAUUACAUCUGGAUCAGUCCCUUGAAAUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-47.80 kcal/mol

Ensemble Metrics

Free Energy: -55.83

Frequency: 0.0000

Diversity: 83.43

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((...((((.((((((...(((((..(((((...............((((...((((.(.(((...((((......))))...))).).)))).))))...((((....))))..((((..(((....................)))..))))...............))))))))))...))))))))))..............((....))(((...........)))..............((((((.......(((((.....))))).......)))))).........(((((.((.(.(((..............))).).))...))))).....))))(((....)))

Thermodynamic Ensemble Prediction

((({...((((.((((((,..{{(({..,{{{,,,..........{{{((((...{{{(.{.,,,...{{,({,{{..,||}...}}}.,.)))),.......((((....))))..,.||}}|||........||,.|.,|,...,,,..)))}..,|..|{,{|,,..,)))))))}),..})))))}}},......,.......{{....},(((...........)))..............((((((.....{{({.{{.....},))))...,..)))))).........(((((.,{.(.(((..............))).}.}}...))))).....})))(((....)))